Educational resources

Genomics tools

  • CPT Phage Galaxy: tools and workflows for phage genome analysis and annotation
  • Genome Solver: teaching comparative microbial genomics for undergraduates
  • PhyloSuite: phylogeny pipeline and tutorials
  • Gene Ontology Consortium: world’s largest source of information on the functions of genes, as a foundation for computational analysis of large-scale molecular biology and genetics experiments in biomedical research

Model organism genome databases

  • Alliance of Genome Resources: consortium of seven model organism databases and the GO Consortium.
    • FlyBase: genetic, molecular, genomic and reagent resources for Drosophila melanogaster
    • Mouse Genome Database (MGD): integrated biological data to facilitate the study of human health and disease using the laboratory mouse
    • Rat Genome Database (MGD): genetic, genomic, phenotype, and disease-related data generated from rat research
    • Saccharomyces Genome Database (SGD): curated biological information integrated with search and analysis tools
    • WormBase: accurate, current, accessible information concerning the genetics, genomics and biology of C. elegans and related nematodes
    • Xenbase: diverse and rich genomic, expression and functional data available from Xenopus research
    • Zebrafish Information Network (ZFIN): database of genetic and genomic data for the zebrafish Danio rerio
  • dictyBase: central resource for Dictyostelid genomics
  • FungiDB: fungal and oomycete informatics resources